3FDU Isomerase date Nov 26, 2008
title Crystal Structure Of A Putative Enoyl-Coa Hydrataseisomeras Acinetobacter Baumannii
authors J.B.Bonanno, M.Dickey, K.T.Bain, B.K.Tang, R.Romero, S.Wasserman, J.M.Sauder, S.K.Burley, S.C.Almo, New York Sgx Research Center Structural Genomics (Nysgxrc)
compound source
Molecule: Putative Enoyl-Coa Hydrataseisomerase
Chain: A, B, C, D, E, F
Engineered: Yes
Mutation: Yes
 Organism_scientific: Acinetobacter Baumannii
Organism_taxid: 400667
Strain: Atcc 17978
Gene: A1s_2548
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Modified Pet26
symmetry Space Group: P 1 21 1
R_factor 0.226 R_Free 0.283
crystal
cell
length a length b length c angle alpha angle beta angle gamma
84.584 71.731 132.885 90.00 91.36 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand GOL, SO4 enzyme
Gene A1S
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, E, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (225 Kb) [Save to disk]
  • Biological Unit Coordinates (3fdu.pdb1.gz) 114 Kb
  • Biological Unit Coordinates (3fdu.pdb2.gz) 108 Kb
  • LPC: Ligand-Protein Contacts for 3FDU
  • CSU: Contacts of Structural Units for 3FDU
  • Structure Factors (4983 Kb)
  • Retrieve 3FDU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3FDU from S2C, [Save to disk]
  • Re-refined 3fdu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3FDU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3FDU
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3FDU, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3fdu] [3fdu_E] [3fdu_A] [3fdu_B] [3fdu_C] [3fdu_D] [3fdu_F]
  • SWISS-PROT database: [A3M7S1]
  • Domain organization of [A3M7S1_ACIBT] by SWISSPFAM
    • Other resources with information on 3FDU
  • Community annotation for 3FDU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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