3FG6 Actin-Binding Protein date Dec 05, 2008
title Structure Of The C-Terminus Of Adseverin
authors R.C.Robinson
compound source
Molecule: Adseverin
Chain: A, C, G, E, F, H, D, B
Fragment: C-Terminal Domain
Synonym: Scinderin
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Scin, Kiaa1905
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 Codonplus (De3)-Ril
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Psy5 (Modified Pet21d)
symmetry Space Group: P 1
R_factor 0.244 R_Free 0.295
crystal
cell
length a length b length c angle alpha angle beta angle gamma
67.644 90.384 98.839 88.79 88.26 76.26
method X-Ray Diffractionresolution 3.00 Å
ligand CA enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B, H, C, D, G


Primary referenceThe crystal structure of the C-terminus of adseverin reveals the actin-binding interface., Chumnarnsilpa S, Lee WL, Nag S, Kannan B, Larsson M, Burtnick LD, Robinson RC, Proc Natl Acad Sci U S A. 2009 Aug 18;106(33):13719-24. Epub 2009 Aug 4. PMID:19666531
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (373 Kb) [Save to disk]
  • Biological Unit Coordinates (3fg6.pdb1.gz) 50 Kb
  • Biological Unit Coordinates (3fg6.pdb2.gz) 51 Kb
  • Biological Unit Coordinates (3fg6.pdb3.gz) 50 Kb
  • Biological Unit Coordinates (3fg6.pdb4.gz) 48 Kb
  • Biological Unit Coordinates (3fg6.pdb5.gz) 50 Kb
  • Biological Unit Coordinates (3fg6.pdb6.gz) 52 Kb
  • Biological Unit Coordinates (3fg6.pdb7.gz) 50 Kb
  • Biological Unit Coordinates (3fg6.pdb8.gz) 50 Kb
  • LPC: Ligand-Protein Contacts for 3FG6
  • CSU: Contacts of Structural Units for 3FG6
  • Structure Factors (501 Kb)
  • Retrieve 3FG6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3FG6 from S2C, [Save to disk]
  • Re-refined 3fg6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3FG6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3FG6
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3FG6, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3fg6_A] [3fg6_H] [3fg6_B] [3fg6_C] [3fg6_G] [3fg6_D] [3fg6_E] [3fg6] [3fg6_F]
  • SWISS-PROT database: [Q9Y6U3]
  • Domain organization of [ADSV_HUMAN] by SWISSPFAM
  • Domain found in 3FG6: [GEL ] by SMART
    • Other resources with information on 3FG6
  • Community annotation for 3FG6 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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