3FJO Oxidoreductase date Dec 15, 2008
title Structure Of Chimeric Yh Cpr
authors S.Morera, L.Aigrain, G.Truan
compound source
Molecule: Nadph-Cytochrome P450 Reductase
Chain: A
Fragment: Yeast Fmn Domain, Unp Residues 44-211, Human Fad Cpr, Unp Residues 232-677;
Synonym: Cpr, P450r
Ec: 1.6.2.4
Engineered: Yes
Organism_scientific: Saccharomyces Cerevisiae, Homo Sapiens
Organism_common: Baker'S Yeast, Human
Organism_taxid: 4932, 9606
Gene: Ncp1, Por
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
symmetry Space Group: C 1 2 1
R_factor 0.222 R_Free 0.290
crystal
cell
length a length b length c angle alpha angle beta angle gamma
146.800 60.700 78.860 90.00 103.36 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand FAD, FMN enzyme Oxidoreductase E.C.1.6.2.4 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of the open conformation of a functional chimeric NADPH cytochrome P450 reductase., Aigrain L, Pompon D, Morera S, Truan G, EMBO Rep. 2009 May 29. PMID:19483672
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (105 Kb) [Save to disk]
  • Biological Unit Coordinates (3fjo.pdb1.gz) 100 Kb
  • LPC: Ligand-Protein Contacts for 3FJO
  • CSU: Contacts of Structural Units for 3FJO
  • Likely Quarternary Molecular Structure file(s) for 3FJO
  • Structure Factors (202 Kb)
  • Retrieve 3FJO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3FJO from S2C, [Save to disk]
  • Re-refined 3fjo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3FJO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3FJO
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3FJO, from MSDmotif at EBI
  • Fold representative 3fjo from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3fjo] [3fjo_A]
  • SWISS-PROT database: [P16435] [P16603]
  • Domain organization of [NCPR_HUMAN] [NCPR_YEAST] by SWISSPFAM
  • Alignments of the sequence of 3FJO with the sequences similar proteins can be viewed for 3FJO's classification [NCPR_HUMAN] [NCPR_YEAST] at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification [NCPR_HUMAN] [NCPR_YEAST] at ProtoMap. Click on the Cluster number.
  • Other resources with information on 3FJO
  • Community annotation for 3FJO at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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