3FMV Structural Genomics, Unknown Function date Dec 22, 2008
title Crystal Structure Of The Serine Phosphatase Of Rna Polymeras (Ssu72 Superfamily) From Drosophila Melanogaster. Monoclini Form. Northeast Structural Genomics Consortium Target Fr253
authors A.P.Kuzin, Y.Chen, J.Seetharaman, F.Forouhar, Y.Chinag, Y.Fang, K.Cunningham, L.C.Ma, R.Xiao, J.Liu, M.C.Baran, T.B.Acton, B.Ros G.T.Montelione, J.F.Hunt, L.Tong, Northeast Structural Genomic Consortium (Nesg)
compound source
Molecule: Serine Phosphatase Of Rna Polymerase II Ctd
Chain: A, B, C, D, E, F, G, H
Synonym: Protein Cg14216-Pa, Ld40846p
Engineered: Yes
Organism_scientific: Drosophila Melanogaster
Organism_common: Fruit Fly
Organism_taxid: 7227
Gene: Cg14216, Dmel_cg14216
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)+Magic
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet21
symmetry Space Group: P 1 21 1
R_factor 0.228 R_Free 0.280
crystal
cell
length a length b length c angle alpha angle beta angle gamma
61.983 98.995 158.123 90.00 90.87 90.00
method X-Ray Diffractionresolution 3.31 Å
ligand MSE enzyme
Gene DMEL
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B, H, C, D, G


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (264 Kb) [Save to disk]
  • Biological Unit Coordinates (3fmv.pdb1.gz) 36 Kb
  • Biological Unit Coordinates (3fmv.pdb2.gz) 35 Kb
  • Biological Unit Coordinates (3fmv.pdb3.gz) 36 Kb
  • Biological Unit Coordinates (3fmv.pdb4.gz) 35 Kb
  • Biological Unit Coordinates (3fmv.pdb5.gz) 36 Kb
  • Biological Unit Coordinates (3fmv.pdb6.gz) 35 Kb
  • Biological Unit Coordinates (3fmv.pdb7.gz) 36 Kb
  • Biological Unit Coordinates (3fmv.pdb8.gz) 36 Kb
  • LPC: Ligand-Protein Contacts for 3FMV
  • CSU: Contacts of Structural Units for 3FMV
  • Likely Quarternary Molecular Structure file(s) for 3FMV
  • Structure Factors (772 Kb)
  • Retrieve 3FMV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3FMV from S2C, [Save to disk]
  • Re-refined 3fmv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3FMV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3FMV
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3FMV, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3fmv_D] [3fmv_E] [3fmv_B] [3fmv_G] [3fmv_A] [3fmv_C] [3fmv_F] [3fmv_H] [3fmv]
  • SWISS-PROT database: [Q9VWE4]
  • Domain organization of [Q9VWE4_DROME] by SWISSPFAM
  • Other resources with information on 3FMV
  • Community annotation for 3FMV at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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