3FOK Structural Genomics, Unknown Function date Dec 30, 2008
title Crystal Structure Of Cgl0159 From Corynebacterium Glutamicum (Brevibacterium Flavum). Northeast Structural Genomics Target Cgr115
authors J.Seetharaman, H.Neely, H.Wang, H.Janjua, E.L.Foote, R.Xiao, J.K.Everett, T.B.Acton, B.Rost, G.T.Montelione, J.F.Hunt, L.Tong Northeast Structural Genomics Consortium (Nesg)
compound source
Molecule: Uncharacterized Protein Cgl0159
Chain: A, B, C, D, E, F, G, H, I, J
Engineered: Yes
 Organism_scientific: Corynebacterium Glutamicum
Organism_common: Brevibacterium Flavum
Organism_taxid: 1718
Gene: Cgl0159, Cg0198
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.225 R_Free 0.254
crystal
cell
length a length b length c angle alpha angle beta angle gamma
94.000 176.209 104.239 90.00 101.94 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand MSE enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, A, J, E, B, H, C, D, I, G


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (473 Kb) [Save to disk]
  • Biological Unit Coordinates (3fok.pdb1.gz) 233 Kb
  • Biological Unit Coordinates (3fok.pdb2.gz) 233 Kb
  • LPC: Ligand-Protein Contacts for 3FOK
  • CSU: Contacts of Structural Units for 3FOK
  • Likely Quarternary Molecular Structure file(s) for 3FOK
  • Structure Factors (1752 Kb)
  • Retrieve 3FOK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3FOK from S2C, [Save to disk]
  • Re-refined 3fok structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3FOK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3FOK
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3FOK, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3fok_G] [3fok_J] [3fok] [3fok_I] [3fok_E] [3fok_H] [3fok_F] [3fok_C] [3fok_A] [3fok_B] [3fok_D]
  • SWISS-PROT database: [Q8NTZ2]
  • Domain organization of [Q8NTZ2_CORGL] by SWISSPFAM
    • Other resources with information on 3FOK
  • Community annotation for 3FOK at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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