3FRR Protein Binding date Jan 08, 2009
title Structure Of Human Ist1(Ntd) - (Residues 1-189)(P21)
authors H.L.Schubert, C.P.Hill, M.Bajorek, W.I.Sundquist
compound source
Molecule: Uncharacterized Protein Kiaa0174
Chain: A
Fragment: Unp Residues 1-189
Synonym: Putative Mapk-Activating Protein Pm28
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ist1, Kiaa0174
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)Codon+Ril
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgst
symmetry Space Group: P 1 21 1
R_factor 0.195 R_Free 0.247
crystal
cell
length a length b length c angle alpha angle beta angle gamma
29.251 92.364 33.251 90.00 97.02 90.00
method X-Ray Diffractionresolution 1.80 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis for ESCRT-III protein autoinhibition., Bajorek M, Schubert HL, McCullough J, Langelier C, Eckert DM, Stubblefield WM, Uter NT, Myszka DG, Hill CP, Sundquist WI, Nat Struct Mol Biol. 2009 Jun 14. PMID:19525971
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (39 Kb) [Save to disk]
  • Biological Unit Coordinates (3frr.pdb1.gz) 35 Kb
  • CSU: Contacts of Structural Units for 3FRR
  • Likely Quarternary Molecular Structure file(s) for 3FRR
  • Structure Factors (107 Kb)
  • Retrieve 3FRR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3FRR from S2C, [Save to disk]
  • Re-refined 3frr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3FRR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3FRR
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3FRR, from MSDmotif at EBI
  • Fold representative 3frr from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3frr_A] [3frr]
  • SWISS-PROT database: [P53990]
  • Domain organization of [IST1_HUMAN] by SWISSPFAM
  • Other resources with information on 3FRR
  • Community annotation for 3FRR at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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