3G2F Transferase date Jan 31, 2009
title Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Receptor Type II (Bmpr2) At 2.35 A Resolution
authors A.Chaikuad, C.Thangaratnarajah, A.K.Roos, P.Filippakopoulos, E.S C.Phillips, T.Keates, O.Fedorov, R.Chalk, K.Petrie, A.C.W.Pike, F Delft, C.H.Arrowsmith, A.M.Edwards, J.Weigelt, C.Bountra, S.Knap A.Bullock, Structural Genomics Consortium (Sgc)
compound source
Molecule: Bone Morphogenetic Protein Receptor Type-2
Chain: A, B
Fragment: Unp Residues 189-517, Protein Kinase Domain
Synonym: Bone Morphogenetic Protein Receptor Type II, Bmp T Receptor, Bmpr-II;
Ec: 2.7.11.30
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Bmpr2, Pph1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)-R3
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pnic-Ch
symmetry Space Group: P 21 21 2
R_factor 0.208 R_Free 0.246
crystal
cell
length a length b length c angle alpha angle beta angle gamma
94.540 218.793 44.187 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.35 Å
ligand ADP, CAS, EDO, MG, SO4 enzyme Transferase E.C.2.7.11.30 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (116 Kb) [Save to disk]
  • Biological Unit Coordinates (3g2f.pdb1.gz) 55 Kb
  • Biological Unit Coordinates (3g2f.pdb2.gz) 52 Kb
  • LPC: Ligand-Protein Contacts for 3G2F
  • CSU: Contacts of Structural Units for 3G2F
  • Likely Quarternary Molecular Structure file(s) for 3G2F
  • Structure Factors (1775 Kb)
  • Retrieve 3G2F in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3G2F from S2C, [Save to disk]
  • Re-refined 3g2f structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3G2F in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3G2F
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3G2F, from MSDmotif at EBI
  • Fold representative 3g2f from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3g2f_B] [3g2f] [3g2f_A]
  • SWISS-PROT database: [Q13873]
  • Domain organization of [BMPR2_HUMAN] by SWISSPFAM
  • Domain found in 3G2F: [STYKc ] by SMART
  • Other resources with information on 3G2F
  • Community annotation for 3G2F at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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