3GFD		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	FMN, GOL, IYR	enzyme
Gene Ontology	Chain Function Process Component A, B iodide peroxidase activity
Primary reference	Crystal structure of iodotyrosine deiodinase, a novel flavoprotein responsible for iodide salvage in thyroid glands., Thomas SR, McTamney PM, Adler JM, Laronde-Leblanc N, Rokita SE, J Biol Chem. 2009 Jul 17;284(29):19659-67. Epub 2009 May 12. PMID:19436071

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (91 Kb) [Save to disk] Biological Unit Coordinates (3gfd.pdb1.gz) 84 Kb LPC: Ligand-Protein Contacts for 3GFD CSU: Contacts of Structural Units for 3GFD Likely Quarternary Molecular Structure file(s) for 3GFD Structure Factors (771 Kb) Retrieve 3GFD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3GFD from S2C, [Save to disk] Re-refined 3gfd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3GFD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3gfd] [3gfd_A] [3gfd_B] SWISS-PROT database: [Q9DCX8]

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---