3GFP date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MSE enzyme
note 3GFP is a representative structure
Primary referenceStructure of the C-terminus of the mRNA export factor Dbp5 reveals the interaction surface for the ATPase activator Gle1., Dossani ZY, Weirich CS, Erzberger JP, Berger JM, Weis K, Proc Natl Acad Sci U S A. 2009 Sep 22;106(38):16251-6. Epub 2009 Sep 2. PMID:19805289
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (36 Kb) [Save to disk]
  • Biological Unit Coordinates (3gfp.pdb1.gz) 32 Kb
  • LPC: Ligand-Protein Contacts for 3GFP
  • CSU: Contacts of Structural Units for 3GFP
  • Structure Factors (168 Kb)
  • Retrieve 3GFP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3GFP from S2C, [Save to disk]
  • Re-refined 3gfp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3GFP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3gfp] [3gfp_A]
  • SWISS-PROT database: [P20449]
  • Domain found in 3GFP: [HELICc ] by SMART

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