3GGR Cell Cycle date Mar 02, 2009
title Crystal Structure Of The Human Rad9-Hus1-Rad1 Complex
authors M.Xu, L.Bai, H.Y.Hang, T.Jiang
compound source
Molecule: Cell Cycle Checkpoint Control Protein Rad9a
Chain: A
Fragment: Truncated Hrad9 (Residues 1-270)
Synonym: Hrad9, Dna Repair Exonuclease Rad9 Homolog A
Ec: 3.1.11.2
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Rad9
Expression_system: Pichia Pastoris
Expression_system_taxid: 4922
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Ppicz C

Molecule: Checkpoint Protein Hus1
Chain: B
Synonym: Hhus1
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Hus1
Expression_system: Pichia Pastoris
Expression_system_taxid: 4922
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Ppicz C

Molecule: Cell Cycle Checkpoint Protein Rad1
Chain: C
Synonym: Hrad1, Dna Repair Exonuclease Rad1 Homolog, Rad1-L Damage Checkpoint Protein;
Ec: 3.1.11.2
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Rad1
Expression_system: Pichia Pastoris
Expression_system_taxid: 4922
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Ppicz C
symmetry Space Group: P 1 21 1
R_factor 0.289 R_Free 0.306
crystal
cell
length a length b length c angle alpha angle beta angle gamma
71.029 67.164 83.405 90.00 97.58 90.00
method X-Ray Diffractionresolution 3.20 Å
ligand
enzyme Hydrolase E.C.3.1.11.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


B


C
  • nuclease activity
  • exonuclease activity
  • 3'-5' exonuclease activity


  • Primary referenceStructure and functional implications of the human rad9-hus1-rad1 cell cycle checkpoint complex., Xu M, Bai L, Gong Y, Xie W, Hang H, Jiang T, J Biol Chem. 2009 Jul 31;284(31):20457-61. doi: 10.1074/jbc.C109.022384. Epub, 2009 Jun 17. PMID:19535328
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (122 Kb) [Save to disk]
  • Biological Unit Coordinates (3ggr.pdb1.gz) 117 Kb
  • CSU: Contacts of Structural Units for 3GGR
  • Likely Quarternary Molecular Structure file(s) for 3GGR
  • Structure Factors (97 Kb)
  • Retrieve 3GGR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3GGR from S2C, [Save to disk]
  • Re-refined 3ggr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3GGR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3GGR
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3GGR, from MSDmotif at EBI
  • Fold representative 3ggr from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ggr_C] [3ggr_A] [3ggr_B] [3ggr]
  • SWISS-PROT database: [O60921] [O60671] [Q99638]
  • Domain organization of [HUS1_HUMAN] [RAD1_HUMAN] [RAD9A_HUMAN] by SWISSPFAM
  • Other resources with information on 3GGR
  • Community annotation for 3GGR at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science