OCA Atlas for 3GHG

3GHG

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

BMA, CA, GAL, MAN, NAG, NDG, SIA

enzyme

Gene
Ontology

Chain	Function	Process	Component
C, L, F, I
H, E, K, B
J, D, A, G

Primary reference

Crystal structure of human fibrinogen., Kollman JM, Pandi L, Sawaya MR, Riley M, Doolittle RF, Biochemistry. 2009 May 12;48(18):3877-86. PMID:19296670

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (656 Kb) [Save to disk]

Biological Unit Coordinates (3ghg.pdb1.gz) 320 Kb

Biological Unit Coordinates (3ghg.pdb2.gz) 323 Kb

LPC: Ligand-Protein Contacts for 3GHG

CSU: Contacts of Structural Units for 3GHG

Likely Quarternary Molecular Structure file(s) for 3GHG

Structure Factors (1834 Kb)

Retrieve 3GHG in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3GHG from S2C, [Save to disk]

Re-refined 3ghg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3GHG in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3ghg] [3ghg_A] [3ghg_B] [3ghg_C] [3ghg_D] [3ghg_E] [3ghg_F] [3ghg_G] [3ghg_H] [3ghg_I] [3ghg_J] [3ghg_K] [3ghg_L] [3ghg_M] [3ghg_N] [3ghg_O] [3ghg_P] [3ghg_Q] [3ghg_R] [3ghg_S] [3ghg_T]

SWISS-PROT database: [P02671] [P02675] [P02679]

Domains found in 3GHG: [FBG] [Fib_alpha ] by SMART

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