3H5K		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	EDO, NAG	enzyme
Gene Ontology	Chain Function Process Component B, A toxin activity
Primary reference	Crystal structure of PD-L1, a ribosome inactivating protein from Phytolacca dioica L. Leaves with the property to induce DNA cleavage., Ruggiero A, Di Maro A, Severino V, Chambery A, Berisio R, Biopolymers. 2009 May 18;91(12):1135-1142. PMID:19452522

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (103 Kb) [Save to disk] Biological Unit Coordinates (3h5k.pdb1.gz) 51 Kb Biological Unit Coordinates (3h5k.pdb2.gz) 51 Kb LPC: Ligand-Protein Contacts for 3H5K CSU: Contacts of Structural Units for 3H5K Structure Factors (2456 Kb) Retrieve 3H5K in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3H5K from S2C, [Save to disk] Re-refined 3h5k structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3H5K in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3h5k] [3h5k_A] [3h5k_B] SWISS-PROT database: [P84853]

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---