3HJV Transferase date May 22, 2009
title 1.7 Angstrom Resolution Crystal Structure Of An Acyl Carrier S-Malonyltransferase From Vibrio Cholerae O1 Biovar Eltor S
authors A.S.Halavaty, Z.Wawrzak, S.Anderson, T.Skarina, O.Onopriyenko, K. A.Savchenko, W.F.Anderson, Center For Structural Genomics Of Infectious Diseases (Csgid)
compound source
Molecule: Malonyl Coa-Acyl Carrier Protein Transacylase
Chain: A, B
Engineered: Yes
 Organism_scientific: Vibrio Cholerae
Organism_taxid: 666
Strain: Vibrio Cholerae O1 Biovar Eltor Str. N16961
Gene: Vc_2022
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21-Codonplus(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmcsg7
symmetry Space Group: P 21 21 21
R_factor 0.145 R_Free 0.193
crystal
cell
length a length b length c angle alpha angle beta angle gamma
46.525 87.789 121.957 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.70 Å
ligand 8JZ, CL, CXS, MSE, SO4 enzyme
Gene VC
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (129 Kb) [Save to disk]
  • Biological Unit Coordinates (3hjv.pdb1.gz) 121 Kb
  • LPC: Ligand-Protein Contacts for 3HJV
  • CSU: Contacts of Structural Units for 3HJV
  • Likely Quarternary Molecular Structure file(s) for 3HJV
  • Structure Factors (1082 Kb)
  • Retrieve 3HJV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3HJV from S2C, [Save to disk]
  • Re-refined 3hjv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3HJV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3HJV
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3HJV, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3hjv_A] [3hjv_B] [3hjv]
  • SWISS-PROT database: [Q9KQH6]
  • Domain organization of [Q9KQH6_VIBCH] by SWISSPFAM
    • Other resources with information on 3HJV
  • Community annotation for 3HJV at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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