3JRS Hormone Receptor date Sep 08, 2009
title Crystal Structure Of (+)-Aba-Bound Pyl1
authors K.Miyazono, T.Miyakawa, Y.Sawano, K.Kubota, M.Tanokura
compound source
Molecule: Putative Uncharacterized Protein At5g46790
Chain: A, B, C
Fragment: Unp Residues 8-211
Synonym: Pyl1
Engineered: Yes
Organism_scientific: Arabidopsis Thaliana
Organism_common: Mouse-Ear Cress
Organism_taxid: 3702
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28a
symmetry Space Group: P 41 21 2
R_factor 0.190 R_Free 0.229
length a length b length c angle alpha angle beta angle gamma
97.730 97.730 135.270 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.05 Å
ligand A8S enzyme
A, C, B
  • protein phosphatase inhibito...

  • Primary referenceStructural basis of abscisic acid signalling., Miyazono K, Miyakawa T, Sawano Y, Kubota K, Kang HJ, Asano A, Miyauchi Y, Takahashi M, Zhi Y, Fujita Y, Yoshida T, Kodaira KS, Yamaguchi-Shinozaki K, Tanokura M, Nature. 2009 Dec 3;462(7273):609-14. PMID:19855379
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (97 Kb) [Save to disk]
  • Biological Unit Coordinates (3jrs.pdb1.gz) 32 Kb
  • Biological Unit Coordinates (3jrs.pdb2.gz) 33 Kb
  • Biological Unit Coordinates (3jrs.pdb3.gz) 30 Kb
  • LPC: Ligand-Protein Contacts for 3JRS
  • CSU: Contacts of Structural Units for 3JRS
  • Structure Factors (612 Kb)
  • Retrieve 3JRS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3JRS from S2C, [Save to disk]
  • Re-refined 3jrs structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3JRS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3JRS
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3JRS, from MSDmotif at EBI
  • Fold representative 3jrs from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3jrs] [3jrs_B] [3jrs_C] [3jrs_A]
  • SWISS-PROT database: [Q8VZS8]
  • Domain organization of [PYL1_ARATH] by SWISSPFAM
  • Other resources with information on 3JRS
  • Community annotation for 3JRS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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