3JXG	Cell Adhesion	date	Sep 19, 2009
title	Ca-Like Domain Of Mouse Ptprg
authors	S.Bouyain
compound		source
Molecule: Receptor-Type Tyrosine-Protein Phosphatase Gamma Chain: A, B, C, D Fragment: Carbonic Anhydrase-Like Domain (Unp Residues 55-3 Synonym: Protein-Tyrosine Phosphatase Gamma, R-Ptp-Gamma Ec: 3.1.3.48 Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: Mouse Organism_taxid: 10090 Gene: Ptprg Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Origami2(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet32
symmetry	Space Group: P 1 21 1	R_factor 0.173 R_Free 0.205
crystal cell	length a length b length c angle alpha angle beta angle gamma 82.756 85.140 91.065 90.00 115.71 90.00
method	X-Ray Diffraction	resolution	1.70 Å
ligand		enzyme	Hydrolase E.C.3.1.3.48 BRENDA
Primary reference	The protein tyrosine phosphatases PTPRZ and PTPRG bind to distinct members of the contactin family of neural recognition molecules., Bouyain S, Watkins DJ, Proc Natl Acad Sci U S A. 2010 Feb 9;107(6):2443-8. Epub 2010 Jan 21. PMID:20133774

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (364 Kb) [Save to disk] Biological Unit Coordinates (3jxg.pdb1.gz) 92 Kb Biological Unit Coordinates (3jxg.pdb2.gz) 92 Kb Biological Unit Coordinates (3jxg.pdb3.gz) 94 Kb Biological Unit Coordinates (3jxg.pdb4.gz) 92 Kb CSU: Contacts of Structural Units for 3JXG Structure Factors (1885 Kb) Retrieve 3JXG in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3JXG from S2C, [Save to disk] Re-refined 3jxg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3JXG in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3JXG

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3JXG, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3jxg_B] [3jxg_C] [3jxg_A] [3jxg_D] [3jxg] SWISS-PROT database: [Q05909] Domain organization of [PTPRG_MOUSE] by SWISSPFAM Domain found in 3JXG: [Carb_anhydrase ] by SMART

Other resources with information on 3JXG

Community annotation for 3JXG at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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