3K35	Hydrolase	date	Oct 01, 2009
title	Crystal Structure Of Human Sirt6
authors	P.W.Pan, A.Dong, W.Qiu, P.Loppnau, J.Wang, M.Ravichandran, A.Bochk C.Bountra, J.Weigelt, C.H.Arrowsmith, J.Min, A.M.Edwards, Struct Genomics Consortium (Sgc)
compound		source
Molecule: Nad-Dependent Deacetylase Sirtuin-6 Chain: A, B, C, D, E, F Synonym: Sir2-Like Protein 6 Ec: 3.5.1.- Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Sir2l6, Sirt6 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Codon(+) Prare Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28-Lic
symmetry	Space Group: P 1 21 1	R_factor 0.202 R_Free 0.267
crystal cell	length a length b length c angle alpha angle beta angle gamma 89.388 136.266 89.260 90.00 119.87 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	APR, SO4, UNX, ZN	enzyme	Hydrolase E.C.3.5.1 BRENDA
Gene Ontology	Chain Function Process Component F, A, D, C, E, B
Primary reference	Structure and biochemical functions of SIRT6., Pan PW, Feldman JL, Devries MK, Dong A, Edwards AM, Denu JM, J Biol Chem. 2011 Apr 22;286(16):14575-87. Epub 2011 Mar 1. PMID:21362626

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (283 Kb) [Save to disk] Biological Unit Coordinates (3k35.pdb1.gz) 50 Kb Biological Unit Coordinates (3k35.pdb2.gz) 50 Kb Biological Unit Coordinates (3k35.pdb3.gz) 50 Kb Biological Unit Coordinates (3k35.pdb4.gz) 50 Kb Biological Unit Coordinates (3k35.pdb5.gz) 50 Kb Biological Unit Coordinates (3k35.pdb6.gz) 50 Kb Biological Unit Coordinates (3k35.pdb7.gz) 277 Kb LPC: Ligand-Protein Contacts for 3K35 CSU: Contacts of Structural Units for 3K35 Structure Factors (1814 Kb) Retrieve 3K35 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3K35 from S2C, [Save to disk] Re-refined 3k35 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3K35 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3K35

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3K35, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3k35_A] [3k35_E] [3k35_D] [3k35_C] [3k35_F] [3k35] [3k35_B] SWISS-PROT database: [Q8N6T7] Domain organization of [SIRT6_HUMAN] by SWISSPFAM

Other resources with information on 3K35

Community annotation for 3K35 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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