OCA Atlas for 3K39

3K39

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

BCZ, CA, NAG, YT3 BindingDB

enzyme

Gene
Ontology

Chain	Function	Process	Component
O, H, J, B, F, C, A, P, E, I, D, K, M, N, G, L

Primary reference

Structural and Functional Basis of Resistance to Neuraminidase Inhibitors of Influenza B Viruses., Oakley AJ, Barrett S, Peat TS, Newman J, Streltsov VA, Waddington L, Saito T, Tashiro M, McKimm-Breschkin JL, J Med Chem. 2010 Aug 9. PMID:20695427

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (977 Kb) [Save to disk]

Biological Unit Coordinates (3k39.pdb1.gz) 249 Kb

Biological Unit Coordinates (3k39.pdb2.gz) 251 Kb

Biological Unit Coordinates (3k39.pdb3.gz) 251 Kb

Biological Unit Coordinates (3k39.pdb4.gz) 250 Kb

LPC: Ligand-Protein Contacts for 3K39

CSU: Contacts of Structural Units for 3K39

Structure Factors (4394 Kb)

Retrieve 3K39 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3K39 from S2C, [Save to disk]

Re-refined 3k39 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3K39 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3k39] [3k39_A] [3k39_B] [3k39_C] [3k39_D] [3k39_E] [3k39_F] [3k39_G] [3k39_H] [3k39_I] [3k39_J] [3k39_K] [3k39_L] [3k39_M] [3k39_N] [3k39_O] [3k39_P]

SWISS-PROT database:

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