3KMF	Oxygen Storage, Oxygen Transport	date	Nov 10, 2009
title	Room Temperature Time-Of-Flight Neutron Diffraction Study Of Human Normal Adult Hemoglobin
authors	A.Y.Kovalevsky, Y.Morimoto, T.Chatake
compound		source
Molecule: Hemoglobin Subunit Alpha Chain: A, E Synonym: Hemoglobin Alpha Chain, Alpha-Globin		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
Molecule: Hemoglobin Subunit Beta Chain: C, G Synonym: Hemoglobin Beta Chain, Beta-Globin, Lvv-Hemorphin-		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
symmetry	Space Group: P 1 21 1	R_factor 0.250 R_Free 0.300
crystal cell	length a length b length c angle alpha angle beta angle gamma 63.790 84.450 54.350 90.00 99.33 90.00
method	Neutron Diffraction	resolution	2.00 Å
ligand	HEM	enzyme
Gene Ontology	Chain Function Process Component A, E peroxidase activity C, G peroxidase activity
Primary reference	Direct determination of protonation states of histidine residues in a 2 A neutron structure of deoxy-human normal adult hemoglobin and implications for the bohr effect., Kovalevsky AY, Chatake T, Shibayama N, Park SY, Ishikawa T, Mustyakimov M, Fisher Z, Langan P, Morimoto Y, J Mol Biol. 2010 Apr 30;398(2):276-91. Epub 2010 Mar 15. PMID:20230836

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (201 Kb) [Save to disk] Biological Unit Coordinates (3kmf.pdb1.gz) 195 Kb LPC: Ligand-Protein Contacts for 3KMF CSU: Contacts of Structural Units for 3KMF Structure Factors (302 Kb) Retrieve 3KMF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3KMF from S2C, [Save to disk]

View 3KMF in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3KMF

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3KMF, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3kmf_E] [3kmf_G] [3kmf_A] [3kmf_C] [3kmf] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3KMF

Community annotation for 3KMF at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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