3KS8	Viral Protein Rna	date	Nov 20, 2009
title	Crystal Structure Of Reston Ebolavirus Vp35 Rna Binding Doma Complex With 18bp Dsrna
authors	C.R.Kimberlin, Z.A.Bornholdt, S.Li, V.L.Woods, I.J.Macrae, E.O.Sa
compound		source
Molecule: 5'-R(Apgpapapgpgpapgpgpgpapgpgpgpa -3'; Chain: E Engineered: Yes		Synthetic: Yes
Molecule: 5'-R(Upcpcpupcpcpcpupcpcpcpupcpcpu -3'; Chain: F Engineered: Yes		Synthetic: Yes
Molecule: Polymerase Cofactor Vp35 Chain: A, B, C, D Fragment: C-Terminal Rna Binding Domain (Unp Residues 160-3 Engineered: Yes		Organism_scientific: Reston Ebolavirus Organism_common: Rebov Organism_taxid: 129003 Strain: Reston Gene: Rebovgp2, Vp35 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet46 Eklic
symmetry	Space Group: P 31	R_factor 0.198 R_Free 0.239
crystal cell	length a length b length c angle alpha angle beta angle gamma 85.685 85.685 108.812 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.40 Å
Primary reference	Ebolavirus VP35 uses a bimodal strategy to bind dsRNA for innate immune suppression., Kimberlin CR, Bornholdt ZA, Li S, Woods VL Jr, Macrae IJ, Saphire EO, Proc Natl Acad Sci U S A. 2009 Dec 14. PMID:20018665

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (100 Kb) [Save to disk] Biological Unit Coordinates (3ks8.pdb1.gz) 55 Kb Biological Unit Coordinates (3ks8.pdb2.gz) 56 Kb CSU: Contacts of Structural Units for 3KS8 Structure Factors (278 Kb) Retrieve 3KS8 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3KS8 from S2C, [Save to disk] Re-refined 3ks8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Visual 3D analysis of 3KS8

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3KS8, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3ks8_C] [3ks8_E] [3ks8_F] [3ks8_B] [3ks8_A] [3ks8] [3ks8_D] SWISS-PROT database: [Q8JPY0] Domain organization of [VP35_EBORR] by SWISSPFAM

Other resources with information on 3KS8

Community annotation for 3KS8 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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