3KV5 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand FE2, OGA, SO4, ZN enzyme
Primary referenceEnzymatic and structural insights for substrate specificity of a family of jumonji histone lysine demethylases., Horton JR, Upadhyay AK, Qi HH, Zhang X, Shi Y, Cheng X, Nat Struct Mol Biol. 2010 Jan;17(1):38-43. Epub 2009 Dec 20. PMID:20023638
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (154 Kb) [Save to disk]
  • Biological Unit Coordinates (3kv5.pdb1.gz) 76 Kb
  • Biological Unit Coordinates (3kv5.pdb2.gz) 75 Kb
  • Biological Unit Coordinates (3kv5.pdb3.gz) 148 Kb
  • LPC: Ligand-Protein Contacts for 3KV5
  • CSU: Contacts of Structural Units for 3KV5
  • Structure Factors (571 Kb)
  • Retrieve 3KV5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3KV5 from S2C, [Save to disk]
  • Re-refined 3kv5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3KV5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3kv5] [3kv5_A] [3kv5_D]
  • SWISS-PROT database: [Q6ZMT4]
  • Domains found in 3KV5: [JmjC] [PHD ] by SMART

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