3LMG Transferase date Jan 30, 2010
title Crystal Structure Of The Erbb3 Kinase Domain In Complex With
authors F.Shi, M.A.Lemmon
compound source
Molecule: Receptor Tyrosine-Protein Kinase Erbb-3
Chain: A, B
Fragment: Tyrosine Kinase Domain (Unp Residues 684-1020)
Synonym: C-Erbb3, Tyrosine Kinase-Type Cell Surface Recepto
Ec: 2.7.10.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Erbb3, Her3
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
Expression_system_vector_type: Baculovirus
Expression_system_plasmid: Pfastbac1
symmetry Space Group: C 1 2 1
R_factor 0.252 R_Free 0.285
crystal
cell
length a length b length c angle alpha angle beta angle gamma
193.348 47.981 82.224 90.00 108.11 90.00
method X-Ray Diffractionresolution 2.80 Å
ligand ANP, MG enzyme Transferase E.C.2.7.10.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceErbB3/HER3 intracellular domain is competent to bind ATP and catalyze autophosphorylation., Shi F, Telesco SE, Liu Y, Radhakrishnan R, Lemmon MA, Proc Natl Acad Sci U S A. 2010 Mar 29. PMID:20351256
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (92 Kb) [Save to disk]
  • Biological Unit Coordinates (3lmg.pdb1.gz) 44 Kb
  • Biological Unit Coordinates (3lmg.pdb2.gz) 44 Kb
  • LPC: Ligand-Protein Contacts for 3LMG
  • CSU: Contacts of Structural Units for 3LMG
  • Structure Factors (246 Kb)
  • Retrieve 3LMG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3LMG from S2C, [Save to disk]
  • Re-refined 3lmg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3LMG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3LMG
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3LMG, from MSDmotif at EBI
  • Fold representative 3lmg from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3lmg] [3lmg_A] [3lmg_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3LMG: [TyrKc ] by SMART
  • Other resources with information on 3LMG
  • Community annotation for 3LMG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science