3MYP date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MSE enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B
  • tagatose-6-phosphate kinase ...


    • Primary referenceCrystal structures of LacD from Staphylococcus aureus and LacD.1 from Streptococcus pyogenes: Insights into substrate specificity and virulence gene regulation., Lee SJ, Kim HS, Kim do J, Yoon HJ, Kim KH, Yoon JY, Suh SW, FEBS Lett. 2011 Jan 21;585(2):307-12. Epub 2010 Dec 28. PMID:21192932
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (208 Kb) [Save to disk]
  • Biological Unit Coordinates (3myp.pdb1.gz) 102 Kb
  • Biological Unit Coordinates (3myp.pdb2.gz) 102 Kb
  • LPC: Ligand-Protein Contacts for 3MYP
  • CSU: Contacts of Structural Units for 3MYP
  • Structure Factors (308 Kb)
  • Retrieve 3MYP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3MYP from S2C, [Save to disk]
  • Re-refined 3myp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3MYP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3myp] [3myp_A] [3myp_B] [3myp_C] [3myp_D]
  • SWISS-PROT database:
  • Domain found in 3MYP: [DeoC ] by SMART

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