3ODT		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CA, MES, MSE	enzyme
note	3ODT is a representative structure
Gene Ontology	Chain Function Process Component B, A
Primary reference	WD40 repeat propellers define a ubiquitin-binding domain that regulates turnover of F box proteins., Pashkova N, Gakhar L, Winistorfer SC, Yu L, Ramaswamy S, Piper RC, Mol Cell. 2010 Nov 12;40(3):433-43. PMID:21070969

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (211 Kb) [Save to disk] Biological Unit Coordinates (3odt.pdb1.gz) 104 Kb Biological Unit Coordinates (3odt.pdb2.gz) 104 Kb LPC: Ligand-Protein Contacts for 3ODT CSU: Contacts of Structural Units for 3ODT Structure Factors (808 Kb) Retrieve 3ODT in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3ODT from S2C, [Save to disk] Re-refined 3odt structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3ODT in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3odt] [3odt_A] [3odt_B] SWISS-PROT database: Domain found in 3ODT: [WD40 ] by SMART

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