3OV0 Structure of dodecaheme cytochrome c GSU1996 date
authors Pokkuluri, P.R., Schiffer, M.
compound source
symmetry
R_factor
R_Free 0.298
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.20
ligand HEC enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of a novel dodecaheme cytochrome c from Geobacter sulfurreducens reveals an extended 12nm protein with interacting hemes., Pokkuluri PR, Londer YY, Duke NE, Pessanha M, Yang X, Orshonsky V, Orshonsky L, Erickson J, Zagyansky Y, Salgueiro CA, Schiffer M, J Struct Biol. 2010 Dec 3. PMID:21130881
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (68 Kb) [Save to disk]
  • Biological Unit Coordinates (3ov0.pdb1.gz) 57 Kb
  • Biological Unit Coordinates (3ov0.pdb2.gz) 218 Kb
  • LPC: Ligand-Protein Contacts for 3OV0
  • CSU: Contacts of Structural Units for 3OV0
  • Structure Factors (234 Kb)
  • Retrieve 3OV0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3OV0 from S2C, [Save to disk]
  • Re-refined 3ov0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3OV0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3OV0
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3OV0, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ov0_A] [3ov0]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 3OV0
  • Community annotation for 3OV0 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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