3PDQ		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CL, KC6, NA, NI, ZN	enzyme
Primary reference	Inhibition of Histone Demethylases by 4-Carboxy-2,2'-Bipyridyl Compounds., Chang KH, King ON, Tumber A, Woon EC, Heightman TD, McDonough MA, Schofield CJ, Rose NR, ChemMedChem. 2011 Mar 15. doi: 10.1002/cmdc.201100026. PMID:21412984

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (256 Kb) [Save to disk] Biological Unit Coordinates (3pdq.pdb1.gz) 127 Kb Biological Unit Coordinates (3pdq.pdb2.gz) 124 Kb LPC: Ligand-Protein Contacts for 3PDQ CSU: Contacts of Structural Units for 3PDQ Structure Factors (3183 Kb) Retrieve 3PDQ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3PDQ from S2C, [Save to disk] Re-refined 3pdq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3PDQ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3pdq] [3pdq_A] [3pdq_B] SWISS-PROT database: Domains found in 3PDQ: [JmjC] [JmjN ] by SMART

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