3PE4 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand SO4, UDP BindingDB enzyme
note 3PE4 (Molecule of the Month:pdb141)
Gene
Ontology
ChainFunctionProcessComponent
C, A


Primary referenceStructure of human O-GlcNAc transferase and its complex with a peptide substrate., Lazarus MB, Nam Y, Jiang J, Sliz P, Walker S, Nature. 2011 Jan 27;469(7331):564-7. Epub 2011 Jan 16. PMID:21240259
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (466 Kb) [Save to disk]
  • Biological Unit Coordinates (3pe4.pdb1.gz) 234 Kb
  • Biological Unit Coordinates (3pe4.pdb2.gz) 227 Kb
  • Biological Unit Coordinates (3pe4.pdb3.gz) 465 Kb
  • Biological Unit Coordinates (3pe4.pdb4.gz) 450 Kb
  • LPC: Ligand-Protein Contacts for 3PE4
  • CSU: Contacts of Structural Units for 3PE4
  • Structure Factors (1170 Kb)
  • Retrieve 3PE4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3PE4 from S2C, [Save to disk]
  • Re-refined 3pe4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3PE4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3pe4] [3pe4_A] [3pe4_B] [3pe4_C] [3pe4_D]
  • SWISS-PROT database:
  • Domain found in 3PE4: [TPR ] by SMART

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