3PKY date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MN, UTP enzyme
Primary referenceStructure of a Preternary Complex Involving a Prokaryotic NHEJ DNA Polymerase., Brissett NC, Martin MJ, Pitcher RS, Bianchi J, Juarez R, Green AJ, Fox GC, Blanco L, Doherty AJ, Mol Cell. 2011 Jan 21;41(2):221-31. PMID:21255731
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (165 Kb) [Save to disk]
  • Biological Unit Coordinates (3pky.pdb1.gz) 158 Kb
  • LPC: Ligand-Protein Contacts for 3PKY
  • CSU: Contacts of Structural Units for 3PKY
  • Structure Factors (235 Kb)
  • Retrieve 3PKY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3PKY from S2C, [Save to disk]
  • Re-refined 3pky structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3PKY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3pky] [3pky_A] [3pky_B] [3pky_C] [3pky_D]
  • SWISS-PROT database:

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