3PVL	Motor Protein Protein Transport	date	Dec 07, 2010
title	Structure Of Myosin Viia Myth4-Ferm-Sh3 In Complex With The Sans
authors	L.Wu, L.F.Pan, Z.Y.Wei, M.J.Zhang
compound		source
Molecule: Myosin Viia Isoform 1 Chain: A Fragment: Myth4-Ferm-Sh3 Region Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: Mouse Organism_taxid: 10090 Gene: Myo7a Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 Expression_system_vector_type: Pet32a
Molecule: Usher Syndrome Type-1g Protein Chain: B Fragment: Central Region Of Sans, The Cen1 Motif Synonym: Scaffold Protein Containing Ankyrin Repeats And Sa Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ush1g, Sans Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 Expression_system_vector_type: Pgex4t-1
symmetry	Space Group: P 31 2 1	R_factor 0.228 R_Free 0.259
crystal cell	length a length b length c angle alpha angle beta angle gamma 98.864 98.864 242.278 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.80 Å
ligand	GOL, PO4	enzyme
Gene Ontology	Chain Function Process Component A B
Primary reference	Structure of MyTH4-FERM domains in myosin VIIa tail bound to cargo., Wu L, Pan L, Wei Z, Zhang M, Science. 2011 Feb 11;331(6018):757-60. PMID:21311020

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (107 Kb) [Save to disk] Biological Unit Coordinates (3pvl.pdb1.gz) 101 Kb LPC: Ligand-Protein Contacts for 3PVL CSU: Contacts of Structural Units for 3PVL Structure Factors (1597 Kb) Retrieve 3PVL in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3PVL from S2C, [Save to disk] Re-refined 3pvl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3PVL in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3PVL

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3PVL, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3pvl_B] [3pvl_A] [3pvl] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 3PVL: [B41] [MyTH4] [SH3 ] by SMART

Other resources with information on 3PVL

Community annotation for 3PVL at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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