3Q0D date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 5CM, CL enzyme
Primary referenceA dual flip-out mechanism for 5mC recognition by the Arabidopsis SUVH5 SRA domain and its impact on DNA methylation and H3K9 dimethylation in vivo., Rajakumara E, Law JA, Simanshu DK, Voigt P, Johnson LM, Reinberg D, Patel DJ, Jacobsen SE, Genes Dev. 2011 Jan 15;25(2):137-52. PMID:21245167
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (66 Kb) [Save to disk]
  • Biological Unit Coordinates (3q0d.pdb1.gz) 60 Kb
  • LPC: Ligand-Protein Contacts for 3Q0D
  • CSU: Contacts of Structural Units for 3Q0D
  • Structure Factors (123 Kb)
  • Retrieve 3Q0D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3Q0D from S2C, [Save to disk]
  • Re-refined 3q0d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3Q0D in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3q0d] [3q0d_A] [3q0d_B] [3q0d_C] [3q0d_X]
  • SWISS-PROT database:
  • Domain found in 3Q0D: [SRA ] by SMART

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