3QAP		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	BOG, L2P, LFA, RET	enzyme
note	3QAP is a representative structure
Gene Ontology	Chain Function Process Component A ion channel activity
Primary reference	Active State of Sensory Rhodopsin II: Structural Determinants for Signal Transfer and Proton Pumping., Gushchin I, Reshetnyak A, Borshchevskiy V, Ishchenko A, Round E, Grudinin S, Engelhard M, Buldt G, Gordeliy V, J Mol Biol. 2011 Aug 4. PMID:21840321

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (86 Kb) [Save to disk] Biological Unit Coordinates (3qap.pdb1.gz) 77 Kb LPC: Ligand-Protein Contacts for 3QAP CSU: Contacts of Structural Units for 3QAP Structure Factors (1216 Kb) Retrieve 3QAP in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3QAP from S2C, [Save to disk] Re-refined 3qap structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3QAP in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3qap] [3qap_A] SWISS-PROT database: Domain found in 3QAP: [Bac_rhodopsin ] by SMART

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