3QWM Signaling Protein date Feb 28, 2011
title Crystal Structure Of Gep100, The Plextrin Homology Domain Of And Sec7 Domain-Containing Protein 1 Isoform A
authors P.Filippakopoulos, S.Picaud, I.Felletar, S.Feller, M.Janning, H.S T.Krojer, A.Chaikuad, C.Allerston, F.Von Delft, C.Bountra, C.H.Arrowsmith, J.Weigelt, A.Edwards, S.Knapp, Structural Genom Consortium (Sgc)
compound source
Molecule: Iq Motif And Sec7 Domain-Containing Protein 1
Chain: A
Fragment: Ph Domain, Residues In Unp 643-880
Synonym: Iqsec1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Iqsec1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 65 2 2
R_factor 0.242 R_Free 0.272
crystal
cell
length a length b length c angle alpha angle beta angle gamma
56.730 56.730 234.080 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.39 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk]
  • Biological Unit Coordinates (3qwm.pdb1.gz) 86 Kb
  • CSU: Contacts of Structural Units for 3QWM
  • Structure Factors (472 Kb)
  • Retrieve 3QWM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3QWM from S2C, [Save to disk]
  • Re-refined 3qwm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3QWM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3QWM
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3QWM, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3qwm_A] [3qwm]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3QWM: [PH ] by SMART
  • Other resources with information on 3QWM
  • Community annotation for 3QWM at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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