3QYT Metal Transport date Mar 03, 2011
title Diferric Bound Human Serum Transferrin
authors N.Yang, H.Zhang, M.Wang, Q.Hao, H.Sun
compound source
Molecule: Serotransferrin
Chain: A
Synonym: Serum Transferrin, Transferrin, Beta-1 Metal-Bindi Globulin, Siderophilin
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Other_details: Blood
symmetry Space Group: P 21 21 21
R_factor 0.206 R_Free 0.275
crystal
cell
length a length b length c angle alpha angle beta angle gamma
73.845 90.435 112.299 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.80 Å
ligand CO3, FE, NAG, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • transferrin receptor binding...


    • Primary referenceIron and bismuth bound human serum transferrin reveals a partially-opened conformation in the N-lobe., Yang N, Zhang H, Wang M, Hao Q, Sun H, Sci Rep. 2012;2:999. doi: 10.1038/srep00999. Epub 2012 Dec 19. PMID:23256035
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (226 Kb) [Save to disk]
  • Biological Unit Coordinates (3qyt.pdb1.gz) 219 Kb
  • LPC: Ligand-Protein Contacts for 3QYT
  • CSU: Contacts of Structural Units for 3QYT
  • Structure Factors (274 Kb)
  • Retrieve 3QYT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3QYT from S2C, [Save to disk]
  • Re-refined 3qyt structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3QYT in 3D
  • Proteopedia, because life has more than 2D.
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    • Visual 3D analysis of 3QYT
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3QYT, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3qyt_A] [3qyt]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3QYT: [TR_FER ] by SMART
    • Other resources with information on 3QYT
  • Community annotation for 3QYT at PDBWiki (http://pdbwiki.org)
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