3RDR date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe role of net charge on the catalytic domain and the influence of the cell-wall binding domain on the bactericidal activity, specificity and host-range of phage lysins., Low LY, Yang C, Perego M, Osterman A, Liddington R, J Biol Chem. 2011 Aug 4. PMID:21816821
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (30 Kb) [Save to disk]
  • Biological Unit Coordinates (3rdr.pdb1.gz) 25 Kb
  • Biological Unit Coordinates (3rdr.pdb2.gz) 147 Kb
  • CSU: Contacts of Structural Units for 3RDR
  • Structure Factors (227 Kb)
  • Retrieve 3RDR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3RDR from S2C, [Save to disk]
  • Re-refined 3rdr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3RDR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3rdr] [3rdr_A]
  • SWISS-PROT database:
  • Domain found in 3RDR: [Ami_2 ] by SMART

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science