3RE9 Transferase date Apr 04, 2011
title Crystal Structure Of Sortasec1 From Streptococcus Suis
authors G.Lu, J.Qi, F.Gao, J.Yan, J.Tang, G.F.Gao
compound source
Molecule: Sortase-Like Protein
Chain: A
Fragment: Unp Residues 67-245
Ec: 2.3.2.12
Engineered: Yes
 Organism_scientific: Streptococcus Suis
Organism_taxid: 391295
Strain: 05zyh33
Gene: Ssu05_2098
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-21a
symmetry Space Group: P 21 21 2
R_factor 0.206 R_Free 0.261
crystal
cell
length a length b length c angle alpha angle beta angle gamma
50.343 101.021 36.937 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand
enzyme Transferase E.C.2.3.2.12 BRENDA
Gene SSU05
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (34 Kb) [Save to disk]
  • Biological Unit Coordinates (3re9.pdb1.gz) 30 Kb
  • CSU: Contacts of Structural Units for 3RE9
  • Structure Factors (100 Kb)
  • Retrieve 3RE9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3RE9 from S2C, [Save to disk]
  • Re-refined 3re9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3RE9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3RE9
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3RE9, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3re9_A] [3re9]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 3RE9
  • Community annotation for 3RE9 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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