3RUB	Lyase(Carbon-Carbon)	date	May 25, 1990
title	Crystal Structure Of The Unactivated Form Of Ribulose-1,5-Bi Carboxylase(Slash)Oxygenase From Tobacco Refined At 2.0-Ang Resolution
authors	H.Schreuder, D.Cascio, P.M.G.Curmi, M.S.Chapman, S.W.Suh, D.S.Eis
compound		source
Molecule: Ribulose 1,5-Bisphosphate Carboxylaseoxygenase, Chain: L Ec: 4.1.1.39 Engineered: Yes		Organism_scientific: Nicotiana Tabacum Organism_common: Tobacco Organism_taxid: 4097
Molecule: Ribulose 1,5-Bisphosphate Carboxylaseoxygenase, Chain: S Ec: 4.1.1.39 Engineered: Yes
symmetry	Space Group: I 4 2 2	R_factor R_Free NULL
crystal cell	length a length b length c angle alpha angle beta angle gamma 148.700 148.700 137.500 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	ASN, SO4	enzyme	Lyase E.C.4.1.1.39 BRENDA
related structures	by homologous chain: 1IR1, 1IR2, 1RXO, 1UW9
Gene Ontology	Chain Function Process Component L
Primary reference	Crystal structure of the unactivated form of ribulose-1,5-bisphosphate carboxylase/oxygenase from tobacco refined at 2.0-A resolution., Curmi PM, Cascio D, Sweet RM, Eisenberg D, Schreuder H, J Biol Chem 1992 Aug 25;267(24):16980-9. PMID:1512238

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (101 Kb) [Save to disk] Biological Unit Coordinates (3rub.pdb1.gz) 751 Kb LPC: Ligand-Protein Contacts for 3RUB CSU: Contacts of Structural Units for 3RUB Likely Quarternary Molecular Structure file(s) for 3RUB Retrieve 3RUB in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3RUB from S2C, [Save to disk]

View 3RUB in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3RUB

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3RUB, from MSDmotif at EBI Genome occurence of 3RUB's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d3rubl1, region L:148-467 [Jmol] [rasmolscript] [script source]     - Domain d3rubl2, region L:22-147 [Jmol] [rasmolscript] [script source]     - Domain d3rubs_, region S [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3rub_S] [3rub_L] [3rub] SWISS-PROT database: [P00876] [P69249] Domain organization of [RBL_TOBAC] [RBS_TOBAC] by SWISSPFAM Domain found in 3RUB: [RuBisCO_small ] by SMART

Other resources with information on 3RUB

Community annotation for 3RUB at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Domain movements in 3RUB from the Database of Macromolecular Movements. Images from IMB Jena Image Library of Biological Macromolecules.

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