3S9D	Signaling Protein Receptor	date	Jun 01, 2011
title	Binary Complex Between Ifna2 And Ifnar2
authors	C.Thomas, K.C.Garcia
compound		source
Molecule: Interferon Alpha-2 Chain: A, C Fragment: Ifna2 (Unp Residues 24-188) Synonym: Ifn-Alpha-2, Interferon Alpha-A, Leif A Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ifna2 Expression_system: Trichoplusia Ni Expression_system_taxid: 7111
Molecule: Interferon Alphabeta Receptor 2 Chain: B, D Fragment: Unp Residues 37-232 Synonym: Ifn-R-2, Ifn-Alpha Binding Protein, Ifn-Alphabeta 2, Interferon Alpha Binding Protein, Type I Interferon Rece Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ifnar2, Ifnabr, Ifnarb Expression_system: Trichoplusia Ni Expression_system_taxid: 7111
symmetry	Space Group: P 1 21 1	R_factor 0.204 R_Free 0.233
crystal cell	length a length b length c angle alpha angle beta angle gamma 84.650 62.010 88.080 90.00 92.68 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	CL	enzyme
note	3S9D is a representative structure
Gene Ontology	Chain Function Process Component A, C
Primary reference	Structural Linkage between Ligand Discrimination and Receptor Activation by Type I Interferons., Thomas C, Moraga I, Levin D, Krutzik PO, Podoplelova Y, Trejo A, Lee C, Yarden G, Vleck SE, Glenn JS, Nolan GP, Piehler J, Schreiber G, Garcia KC, Cell. 2011 Aug 19;146(4):621-32. PMID:21854986

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (114 Kb) [Save to disk] Biological Unit Coordinates (3s9d.pdb1.gz) 57 Kb Biological Unit Coordinates (3s9d.pdb2.gz) 54 Kb LPC: Ligand-Protein Contacts for 3S9D CSU: Contacts of Structural Units for 3S9D Structure Factors (459 Kb) Retrieve 3S9D in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3S9D from S2C, [Save to disk] Re-refined 3s9d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3S9D in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3S9D

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3S9D, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3s9d_D] [3s9d_C] [3s9d] [3s9d_B] [3s9d_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3S9D: [IFabd ] by SMART

Other resources with information on 3S9D

Community annotation for 3S9D at PDBWiki (http://pdbwiki.org)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---