3SE3 human IFNa2-IFNAR ternary complex date
authors Thomas, C., Garcia, K.C.
compound source
symmetry
R_factor
R_Free 0.311
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 4.00
ligand NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
B


Primary referenceStructural Linkage between Ligand Discrimination and Receptor Activation by Type I Interferons., Thomas C, Moraga I, Levin D, Krutzik PO, Podoplelova Y, Trejo A, Lee C, Yarden G, Vleck SE, Glenn JS, Nolan GP, Piehler J, Schreiber G, Garcia KC, Cell. 2011 Aug 19;146(4):621-32. PMID:21854986
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (200 Kb) [Save to disk]
  • Biological Unit Coordinates (3se3.pdb1.gz) 192 Kb
  • LPC: Ligand-Protein Contacts for 3SE3
  • CSU: Contacts of Structural Units for 3SE3
  • Structure Factors (79 Kb)
  • Retrieve 3SE3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3SE3 from S2C, [Save to disk]
  • Re-refined 3se3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3SE3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3SE3
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3SE3, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1s3se3, region E:107-200 [Jmol] [rasmolscript] [script source]
        - Domain d1q3se3, region E:146-216,E:370-405 [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3se3_C] [3se3] [3se3_A] [3se3_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 3SE3: [FN3] [IFabd ] by SMART
    • Other resources with information on 3SE3
  • Community annotation for 3SE3 at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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