OCA Atlas for 3SHM

3SHM

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

Gene
Ontology

Chain	Function	Process	Component
C, Q, P, N, J, I, G, S, B, H, O, D, M, A, K, F, T, R, E, L

Primary reference

Structure-function analysis of receptor-binding in adeno-associated virus serotype 6 (AAV-6)., Xie Q, Lerch TF, Meyer NL, Chapman MS, Virology. 2011 Nov 10;420(1):10-9. Epub 2011 Sep 13. PMID:21917284

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1622 Kb) [Save to disk]

Biological Unit Coordinates (3shm.pdb1.gz) 4820 Kb

CSU: Contacts of Structural Units for 3SHM

Structure Factors (479 Kb)

Retrieve 3SHM in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3SHM from S2C, [Save to disk]

Re-refined 3shm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3SHM in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3shm] [3shm_A] [3shm_B] [3shm_C] [3shm_D] [3shm_E] [3shm_F] [3shm_G] [3shm_H] [3shm_I] [3shm_J] [3shm_K] [3shm_L] [3shm_M] [3shm_N] [3shm_O] [3shm_P] [3shm_Q] [3shm_R] [3shm_S] [3shm_T]

SWISS-PROT database:

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