OCA Atlas for 3T5Q

3T5Q

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

PO4

enzyme

Primary reference

Crystal structure of the Lassa virus nucleoprotein-RNA complex reveals a gating mechanism for RNA binding., Hastie KM, Liu T, Li S, King LB, Ngo N, Zandonatti MA, Woods VL Jr, de la Torre JC, Saphire EO, Proc Natl Acad Sci U S A. 2011 Nov 29;108(48):19365-70. Epub 2011 Nov 14. PMID:22084115

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (300 Kb) [Save to disk]

Biological Unit Coordinates (3t5q.pdb1.gz) 53 Kb

Biological Unit Coordinates (3t5q.pdb2.gz) 51 Kb

Biological Unit Coordinates (3t5q.pdb3.gz) 52 Kb

Biological Unit Coordinates (3t5q.pdb4.gz) 51 Kb

Biological Unit Coordinates (3t5q.pdb5.gz) 52 Kb

Biological Unit Coordinates (3t5q.pdb6.gz) 50 Kb

LPC: Ligand-Protein Contacts for 3T5Q

CSU: Contacts of Structural Units for 3T5Q

Structure Factors (2728 Kb)

Retrieve 3T5Q in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3T5Q from S2C, [Save to disk]

Re-refined 3t5q structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3T5Q in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3t5q] [3t5q_A] [3t5q_B] [3t5q_C] [3t5q_D] [3t5q_E] [3t5q_F] [3t5q_G] [3t5q_H] [3t5q_I] [3t5q_J] [3t5q_K] [3t5q_L]

SWISS-PROT database:

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