3TSY Ligase, Transferase date Sep 13, 2011
title 4-Coumaroyl-Coa Ligase::Stilbene Synthase Fusion Protein
authors H.Yi, J.M.Jez
compound source
Molecule: Fusion Protein 4-Coumarate--Coa Ligase 1, Resvera Synthase;
Chain: A
Synonym: 4cl 1, 4-Coumarate--Coa Ligase Isoform 1, At4cl1, Coumaroyl-Coa Synthase 1;
Ec: 6.2.1.12, 2.3.1.95
Engineered: Yes
Organism_scientific: Arabidopsis Thaliana, Vitis Vinifera
Organism_common: Mouse-Ear Cress,Thale-Cress, Wine Grape
Organism_taxid: 3702, 29760
Gene: 4cl1, At1g51680, At4cl1, F19c24.11, Vvsts, Sts1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 41 2 2
R_factor 0.177 R_Free 0.208
crystal
cell
length a length b length c angle alpha angle beta angle gamma
117.554 117.554 243.777 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.10 Å
ligand
enzyme Ligase E.C.6.2.1.12 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural and Kinetic Analysis of the Unnatural Fusion Protein 4-Coumaroyl-CoA Ligase::Stilbene Synthase., Wang Y, Yi H, Wang M, Yu O, Jez JM, J Am Chem Soc. 2011 Dec 5. PMID:22129213
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (272 Kb) [Save to disk]
  • Biological Unit Coordinates (3tsy.pdb1.gz) 528 Kb
  • CSU: Contacts of Structural Units for 3TSY
  • Structure Factors (333 Kb)
  • Retrieve 3TSY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3TSY from S2C, [Save to disk]
  • Re-refined 3tsy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3TSY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3TSY
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3TSY, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3tsy] [3tsy_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3TSY
  • Community annotation for 3TSY at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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