3TVL	Hydrolase	date	Sep 20, 2011
title	Complex Between The Human Thiamine Triphosphatase And Tripho
authors	D.Delvaux, R.Herman, E.Sauvage, P.Wins, L.Bettendorff, P.Charlier
compound		source
Molecule: Thiamine-Triphosphatase Chain: A, B Synonym: Thtpase Ec: 3.6.1.28 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Thtpa Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 1 21 1	R_factor 0.180 R_Free 0.261
crystal cell	length a length b length c angle alpha angle beta angle gamma 46.378 63.529 70.950 90.00 108.75 90.00
method	X-Ray Diffraction	resolution	2.30 Å
ligand	3PO, EDO	enzyme	Hydrolase E.C.3.6.1.28 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structural determinants of specificity and catalytic mechanism in mammalian 25-kDa thiamine triphosphatase., Delvaux D, Kerff F, Murty MR, Lakaye B, Czerniecki J, Kohn G, Wins P, Herman R, Gabelica V, Heuze F, Tordoir X, Maree R, Matagne A, Charlier P, De Pauw E, Bettendorff L, Biochim Biophys Acta. 2013 May 22. pii: S0304-4165(13)00210-9. doi:, 10.1016/j.bbagen.2013.05.014. PMID:23707715

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (138 Kb) [Save to disk] Biological Unit Coordinates (3tvl.pdb1.gz) 67 Kb Biological Unit Coordinates (3tvl.pdb2.gz) 66 Kb LPC: Ligand-Protein Contacts for 3TVL CSU: Contacts of Structural Units for 3TVL Structure Factors (257 Kb) Retrieve 3TVL in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3TVL from S2C, [Save to disk] Re-refined 3tvl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3TVL in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3TVL

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3TVL, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3tvl] [3tvl_A] [3tvl_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3TVL: [CYTH ] by SMART

Other resources with information on 3TVL

Community annotation for 3TVL at PDBWiki (http://pdbwiki.org)

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