3V79	Transcription Dna	date	Dec 20, 2011
title	Structure Of Human Notch1 Transcription Complex Including Cs Ank, And Maml-1 On Hes-1 Promoter Dna Sequence
authors	Y.Nam, P.Sliz, S.Blacklow
compound		source
Molecule: Neurogenic Locus Notch Homolog Protein 1 Chain: K Synonym: Notch 1, Hn1, Translocation-Associated Notch Prote Notch 1 Extracellular Truncation, Notch 1 Intracellular Dom Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Notch1, Tan1 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Recombining Binding Protein Suppressor Of Hairles Chain: C Synonym: Cbf-1, J Kappa-Recombination Signal-Binding Protei Kappa, Rbp-J, Rbp-Jk, Renal Carcinoma Antigen Ny-Ren-30; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Igkjrb, Igkjrb1, Rbpj, Rbpjk, Rbpsuh Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Mastermind-Like Protein 1 Chain: M Synonym: Mam-1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Maml1, Kiaa0200 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Dna 5'- D(Gptptpapcptpgptpgpgpgpapapapgpapapa)-3' Chain: X Engineered: Yes		Synthetic: Yes Other_details: Synthesized Oligonucleotides
Molecule: Dna 5'- D(Tptptpcptptptpcpcpcpapcpapgptpapapc)-3' Chain: Y Engineered: Yes		Synthetic: Yes Other_details: Synthesized Oligonucleotides
Molecule: Ram Chain: R Engineered: Yes		Organism_scientific: Homo Sapiens Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 63 2 2	R_factor 0.213 R_Free 0.245
crystal cell	length a length b length c angle alpha angle beta angle gamma 272.646 272.646 119.987 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	3.85 Å
Gene Ontology	Chain Function Process Component C M
Primary reference	Conformational locking upon cooperative assembly of notch transcription complexes., Choi SH, Wales TE, Nam Y, O'Donovan DJ, Sliz P, Engen JR, Blacklow SC, Structure. 2012 Feb 8;20(2):340-9. PMID:22325781

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (124 Kb) [Save to disk] Biological Unit Coordinates (3v79.pdb1.gz) 119 Kb CSU: Contacts of Structural Units for 3V79 Structure Factors (227 Kb) Retrieve 3V79 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3V79 from S2C, [Save to disk] Re-refined 3v79 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3V79 in 3D

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Visual 3D analysis of 3V79

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3V79, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3v79_M] [3v79_Y] [3v79_K] [3v79_C] [3v79_R] [3v79_X] [3v79] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 3V79: [ANK] [BTD] [LAG1_DNAbind] [MamL-1 ] by SMART

Other resources with information on 3V79

Community annotation for 3V79 at PDBWiki (http://pdbwiki.org)

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