3VA0 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CO, MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A
  • nuclease activity
  • exonuclease activity
  • ribonuclease activity
  • 3'-5' exonuclease activity
  • exoribonuclease activity, pr...


  • Primary referenceHow an exonuclease decides where to stop in trimming of nucleic acids: crystal structures of RNase T-product complexes., Hsiao YY, Duh Y, Chen YP, Wang YT, Yuan HS, Nucleic Acids Res. 2012 Jun 19. PMID:22718982
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (79 Kb) [Save to disk]
  • Biological Unit Coordinates (3va0.pdb1.gz) 74 Kb
  • LPC: Ligand-Protein Contacts for 3VA0
  • CSU: Contacts of Structural Units for 3VA0
  • Structure Factors (197 Kb)
  • Retrieve 3VA0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3VA0 from S2C, [Save to disk]
  • Re-refined 3va0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3VA0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3va0] [3va0_A] [3va0_B] [3va0_C] [3va0_D]
  • SWISS-PROT database:
  • Domain found in 3VA0: [EXOIII ] by SMART

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