3VGJ		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	AMP, TYR	enzyme
Gene Ontology	Chain Function Process Component A, B host cell surface receptor b...
Primary reference	Malaria parasite tyrosyl-tRNA synthetase secretion triggers pro-inflammatory responses., Bhatt TK, Khan S, Dwivedi VP, Banday MM, Sharma A, Chandele A, Camacho N, de Pouplana LR, Wu Y, Craig AG, Mikkonen AT, Maier AG, Yogavel M, Sharma A, Nat Commun. 2011 Nov 8;2:530. doi: 10.1038/ncomms1522. PMID:22068597

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (247 Kb) [Save to disk] Biological Unit Coordinates (3vgj.pdb1.gz) 241 Kb LPC: Ligand-Protein Contacts for 3VGJ CSU: Contacts of Structural Units for 3VGJ Structure Factors (298 Kb) Retrieve 3VGJ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3VGJ from S2C, [Save to disk] Re-refined 3vgj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3VGJ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3vgj] [3vgj_A] [3vgj_B] SWISS-PROT database:

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