3VK4 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand HCS, LLP enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, D, C, A


Primary referenceThe Role of Amino Acid Residues in the Active Site of <small>L</small>-Methionine gamma-lyase from <i>Pseudomonas putida</i>., Fukumoto M, Kudou D, Murano S, Shiba T, Sato D, Tamura T, Harada S, Inagaki K, Biosci Biotechnol Biochem. 2012 Jul 23;76(7):1275-84. Epub 2012 Jul 7. PMID:22785484
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (243 Kb) [Save to disk]
  • Biological Unit Coordinates (3vk4.pdb1.gz) 120 Kb
  • Biological Unit Coordinates (3vk4.pdb2.gz) 120 Kb
  • LPC: Ligand-Protein Contacts for 3VK4
  • CSU: Contacts of Structural Units for 3VK4
  • Structure Factors (904 Kb)
  • Retrieve 3VK4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3VK4 from S2C, [Save to disk]
  • Re-refined 3vk4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3VK4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3vk4] [3vk4_A] [3vk4_B] [3vk4_C] [3vk4_D]
  • SWISS-PROT database:

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science