3VQI		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	EPE, SO4	enzyme
Gene Ontology	Chain Function Process Component D, B, E, C, A enzyme activator activity
Primary reference	Structural insights into atg10-mediated formation of the autophagy-essential atg12-atg5 conjugate., Yamaguchi M, Noda NN, Yamamoto H, Shima T, Kumeta H, Kobashigawa Y, Akada R, Ohsumi Y, Inagaki F, Structure. 2012 Jul 3;20(7):1244-54. Epub 2012 Jun 7. PMID:22682742

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (207 Kb) [Save to disk] Biological Unit Coordinates (3vqi.pdb1.gz) 43 Kb Biological Unit Coordinates (3vqi.pdb2.gz) 44 Kb Biological Unit Coordinates (3vqi.pdb3.gz) 40 Kb Biological Unit Coordinates (3vqi.pdb4.gz) 43 Kb Biological Unit Coordinates (3vqi.pdb5.gz) 44 Kb LPC: Ligand-Protein Contacts for 3VQI CSU: Contacts of Structural Units for 3VQI Structure Factors (658 Kb) Retrieve 3VQI in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3VQI from S2C, [Save to disk] Re-refined 3vqi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3VQI in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3vqi] [3vqi_A] [3vqi_B] [3vqi_C] [3vqi_D] [3vqi_E] SWISS-PROT database:

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