3VTA date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BMA, DFP, FUC, MAN, NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceCrystal structure of cucumisin, a subtilisin-like endoprotease from Cucumis melo L., Murayama K, Kato-Murayama M, Hosaka T, Sotokawauchi A, Yokoyama S, Arima K, Shirouzu M, J Mol Biol. 2012 Oct 26;423(3):386-96. doi: 10.1016/j.jmb.2012.07.013. Epub 2012 , Jul 24. PMID:22841692
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (192 Kb) [Save to disk]
  • Biological Unit Coordinates (3vta.pdb1.gz) 95 Kb
  • Biological Unit Coordinates (3vta.pdb2.gz) 95 Kb
  • LPC: Ligand-Protein Contacts for 3VTA
  • CSU: Contacts of Structural Units for 3VTA
  • Structure Factors (409 Kb)
  • Retrieve 3VTA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3VTA from S2C, [Save to disk]
  • Re-refined 3vta structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3VTA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3vta] [3vta_A] [3vta_B]
  • SWISS-PROT database:

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