3VWE Transferase date Aug 22, 2012
title Crystal Structure Of Alpha-Tubulin Acetyltransferase Domain Mec-17 In Complex With Coa (P21 Form)
authors S.Yuzawa, H.Sumimoto
compound source
Molecule: Alpha-Tubulin N-Acetyltransferase
Chain: A
Fragment: Alpha-Tubulin Acetyltransferase Domain, Unp Resid
Synonym: Alpha-Tat, Tat, Acetyltransferase Mec-17 Homolog
Ec: 2.3.1.108
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Atat1, C6orf134, Mec17, Nbla00487
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Prsfduet-1
symmetry Space Group: P 1 21 1
R_factor 0.180 R_Free 0.225
crystal
cell
length a length b length c angle alpha angle beta angle gamma
43.726 34.998 63.981 90.00 103.24 90.00
method X-Ray Diffractionresolution 1.96 Å
ligand COA enzyme Transferase E.C.2.3.1.108 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (37 Kb) [Save to disk]
  • Biological Unit Coordinates (3vwe.pdb1.gz) 33 Kb
  • LPC: Ligand-Protein Contacts for 3VWE
  • CSU: Contacts of Structural Units for 3VWE
  • Structure Factors (192 Kb)
  • Retrieve 3VWE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3VWE from S2C, [Save to disk]
  • Re-refined 3vwe structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3VWE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3VWE
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3VWE, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3vwe_A] [3vwe]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3VWE
  • Community annotation for 3VWE at PDBWiki (http://pdbwiki.org)

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