3VZI date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • endonuclease activity


    • Primary referenceConservation and Variability in the Structure and Function of the Cas5d Endoribonuclease in the CRISPR-Mediated Microbial Immune System., Koo Y, Ka D, Kim EJ, Suh N, Bae E, J Mol Biol. 2013 Oct 23;425(20):3799-810. doi: 10.1016/j.jmb.2013.02.032. Epub, 2013 Mar 7. PMID:23500492
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (146 Kb) [Save to disk]
  • Biological Unit Coordinates (3vzi.pdb1.gz) 71 Kb
  • Biological Unit Coordinates (3vzi.pdb2.gz) 71 Kb
  • Biological Unit Coordinates (3vzi.pdb3.gz) 140 Kb
  • CSU: Contacts of Structural Units for 3VZI
  • Structure Factors (302 Kb)
  • Retrieve 3VZI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3VZI from S2C, [Save to disk]
  • Re-refined 3vzi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3VZI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3vzi] [3vzi_A] [3vzi_B]
  • SWISS-PROT database:

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