3WVZ Transport Protein date Jun 12, 2014
title Crystal Structure Of Hikeshi, A New Nuclear Transport Recept Hsp70
authors J.Song, S.Kose, A.Watanabe, S.Y.Son, S.Choi, R.H.Hong, E.Yamashita I.Y.Park, N.Imamoto, S.J.Lee
compound source
Molecule: Protein Hikeshi
Chain: A, B
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: C11orf73, Hspc138, Hspc179, Hspc248
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 2 2 21
R_factor 0.207 R_Free 0.228
crystal
cell
length a length b length c angle alpha angle beta angle gamma
61.138 137.839 97.902 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.88 Å
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural and functional analysis of Hikeshi, a new nuclear transport receptor of Hsp70s., Song J, Kose S, Watanabe A, Son SY, Choi S, Hong H, Yamashita E, Park IY, Imamoto N, Lee SJ, Acta Crystallogr D Biol Crystallogr. 2015 Mar 1;71(Pt 3):473-83. doi:, 10.1107/S1399004714026881. Epub 2015 Feb 26. PMID:25760597
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (128 Kb) [Save to disk]
  • Biological Unit Coordinates (3wvz.pdb1.gz) 123 Kb
  • CSU: Contacts of Structural Units for 3WVZ
  • Structure Factors (660 Kb)
  • Retrieve 3WVZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3WVZ from S2C, [Save to disk]
  • Re-refined 3wvz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3WVZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3WVZ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3WVZ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3wvz_A] [3wvz] [3wvz_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 3WVZ
  • Community annotation for 3WVZ at PDBWiki (http://pdbwiki.org)

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